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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc11_g06670 |
Common Name | GSCOC_T00020691001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
HSF |
Protein Properties |
Length: 383aa MW: 43476.9 Da PI: 4.7604 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc11_g06670 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 112.2 | 3.5e-35 | 14 | 107 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97
Fl k+ye+++de+++elisws +++nsf+++d ++f++++Lpk+Fkhsnf+SFvRQLn+YgF+k+++++ weF++++F kg+++ll++i
Cc11_g06670 14 FLLKIYEMVSDESTDELISWSqTHSNSFIIWDVSRFSSELLPKHFKHSNFSSFVRQLNIYGFHKSDTDR---------WEFSNDEFVKGQRHLLKNI 101
9********************8888****************************************9999.........******************* PP
XXXXXX CS
HSF_DNA-bind 98 krkkse 103
r+k++
Cc11_g06670 102 VRRKQT 107
***986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MVKSLENGSS VAPFLLKIYE MVSDESTDEL ISWSQTHSNS FIIWDVSRFS SELLPKHFKH 60 SNFSSFVRQL NIYGFHKSDT DRWEFSNDEF VKGQRHLLKN IVRRKQTPAQ AQRKSSQQKD 120 ADPGASEEDR RTALRKEVET LKIDKNTLMQ ELIKLKQHQQ TSQSKLVLVR DQLKGMEKNQ 180 QQMLSFIVMV MQNPGFFIQL LQPKENNWRA AETGKHKFST VDDDCEPLSS DGAIIRYQLP 240 ANEPSEPPCI APSSSSEKPV ELDLSDEIRD LLLSVDFTPL PLDEKMLSLE NHGPLVLPDS 300 PGGDFLMDQL LLSCPLAESK DTDEPDSEVY LDTGMDIESA FQAQESNKLK SPKDGSNQNR 360 WVDTTGIRKQ LDNLESLDFL TV*
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