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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc10_g03110 |
Common Name | GSCOC_T00024832001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
C2H2 |
Protein Properties |
Length: 538aa MW: 55780.7 Da PI: 9.0819 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc10_g03110 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 17.1 | 1.5e-05 | 58 | 80 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C+k F r nL+ H r H
Cc10_g03110 58 FVCEICNKGFQRDQNLQLHRRGH 80
89*******************88 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 538 aa
Download sequence Send
to blast |
MATAPSASEE ASVSSAGNPM IAAQVGPVKK KRNLPGMPDP DAEVIALSPK TLLATNRFVC 60 EICNKGFQRD QNLQLHRRGH NLPWKLRQRN GKEVKKRVYV CPEATCIHHD PSRALGDLTG 120 IKKHFCRKHG EKKWKCERCS KKYAVISDWK AHTKTCGTRE YRCDCGTLFS RRDSFITHRA 180 FCDALAQESA RSQTQTLAIT NEEGTLKVQA QTTTTRTSSS SPPPPPLTPS TGVLSPVLSI 240 HSSEMPENLI GRSQPQPGTP QLSATSTTSA AAATAGNSSD ANVSSTTGVF ASILGASGSA 300 GLSRSSQSPS SFSGLLCAMG GPGRSAVEPI SLSLSSSLYL SNHPSTLFPS TPQDHHPRHY 360 STNPQPALSA TALLQKAAQI GAASSGSSFL RGLGLAMPSS SDLQDNCASP SPATAPATAS 420 ASASTANWMM SHVKPENGSV APGQLGLGLA SDHAASGLTD LMMGPPTIFG GKPTTLDFLG 480 LGMAPGAPSS DGISAYLSSM RGGGLDVAAV AATSTFGGIN LGGSGWDDSS DRKPTLL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor promoting the transition to germination by regulating light and hormonal signaling during seed maturation (PubMed:21571950). Acts as a positive regulator of phytochrome and/or gibberellin action (PubMed:21571950, PubMed:25035403). {ECO:0000269|PubMed:21571950, ECO:0000269|PubMed:25035403}. |