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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cc09_g08060 | ||||||||
Common Name | GSCOC_T00003804001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family | BES1 | ||||||||
Protein Properties | Length: 223aa MW: 23601.1 Da PI: 10.2649 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 118.5 | 9.8e-37 | 17 | 115 | 1 | 97 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas.....aspess 93 gg+g ++++ E+E++k+RER+RR i++ki+ GLR++G+y+l raD+n+Vl+ L++eAGw+ve+DGttyr +s+ ++ +s+ +s++ss Cc09_g08060 17 GGGGSMRSAVEKERTKLRERQRRSITTKIFHGLRKHGGYPLSPRADINQVLRHLAQEAGWIVEPDGTTYRSSSSAS---TITTTSNVcplcgNSKKSS 111 57899999**************************************************************777766...3333333310011333333 PP DUF822 94 lqss 97 s Cc09_g08060 112 FVGS 115 3211 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.2E-33 | 19 | 128 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MKEAGGAGDQ RSSSGGGGGG SMRSAVEKER TKLRERQRRS ITTKIFHGLR KHGGYPLSPR 60 ADINQVLRHL AQEAGWIVEP DGTTYRSSSS ASTITTTSNV CPLCGNSKKS SFVGSATIGE 120 CSTTASPSRL TTAGDSISQP TTTTTDIYRD HMHHSLVATY MYGGGGERGG RAHYMTAAAG 180 ENKLGQGQVA AAWSPSTYME VQWMEARASN QNTPAGSPRR RT* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027086506.1 | 1e-163 | beta-amylase 7-like | ||||
TrEMBL | A0A068V9J3 | 1e-161 | A0A068V9J3_COFCA; Uncharacterized protein | ||||
STRING | Migut.M01888.1.p | 3e-51 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15594 | 6 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 3e-19 | beta-amylase 7 |