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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc09_g04160 |
Common Name | GSCOC_T00017460001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
LBD |
Protein Properties |
Length: 153aa MW: 16902.2 Da PI: 8.3168 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc09_g04160 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 120.9 | 7.3e-38 | 5 | 104 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98
+Ca+Ck+lrr+C+++C+l+p+fp ++p++fa+vhk++Gasnv k+l+++p ++r +a+++++yeA +r++dPvyG+vg++ lqqq+ ++ +la+++
Cc09_g04160 5 RCAGCKYLRRRCPSNCILSPHFPPNDPQRFACVHKIYGASNVAKMLQQVPVQQRAEAANAMYYEAYCRIKDPVYGCVGTVALLQQQIFDAECQLAKIQ 102
6**********************************************************************************************999 PP
DUF260 99 ee 100
+e
Cc09_g04160 103 AE 104
87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 153 aa
Download sequence Send
to blast |
MNSKRCAGCK YLRRRCPSNC ILSPHFPPND PQRFACVHKI YGASNVAKML QQVPVQQRAE 60 AANAMYYEAY CRIKDPVYGC VGTVALLQQQ IFDAECQLAK IQAEIAVLNG HREATHQNQQ 120 VKVATSSANF TLESGGEGTF SSTYDPSICQ FY*
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