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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cc09_g02760 |
| Common Name | GSCOC_T00017632001 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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| Family |
LBD |
| Protein Properties |
Length: 192aa MW: 21594.4 Da PI: 5.0075 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cc09_g02760 | genome | CGSC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 131.5 | 3.4e-41 | 24 | 123 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98
+CaaCk lrr+C+++Cvlapyfp+++p +f++vhk++Gasn+++ l++lpe++r+dam+s+vyeA ar+ dPvyG++g+++ lqqq+ l++ela+++
Cc09_g02760 24 PCAACKSLRRRCSDNCVLAPYFPSSEPLRFNIVHKVYGASNIIRRLQELPEHQRSDAMNSMVYEAAARITDPVYGCAGTVTLLQQQILGLQEELAKAQ 121
7**********************************************************************************************998 PP
DUF260 99 ee 100
e
Cc09_g02760 122 GE 123
76 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 192 aa
Download sequence Send
to blast |
MEHCRQQNTP PSPDQNATPR TQYPCAACKS LRRRCSDNCV LAPYFPSSEP LRFNIVHKVY 60
GASNIIRRLQ ELPEHQRSDA MNSMVYEAAA RITDPVYGCA GTVTLLQQQI LGLQEELAKA 120
QGEILNMQCQ IANLVSLNWM EMFPSQEQET INVSGLQQDI IHVSEKQPWD DSDTTNFSLE 180
QLCIHEKAMG I*
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