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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cc09_g00080 |
| Common Name | GSCOC_T00017993001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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| Family |
G2-like |
| Protein Properties |
Length: 301aa MW: 32671.3 Da PI: 8.0737 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cc09_g00080 | genome | CGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 103.9 | 9.9e-33 | 52 | 106 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt +LH+rFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl
Cc09_g00080 52 KPRLRWTADLHDRFVDAVAQLGGPTKATPKAIMRTMGVKGLTLFHLKSHLQKYRL 106
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MLPRLIQPRE GVIIQEEHIN NSSSNRTTAG VGIGAIGVGL GDPCLVLTSD PKPRLRWTAD 60
LHDRFVDAVA QLGGPTKATP KAIMRTMGVK GLTLFHLKSH LQKYRLGKQS GKDLVEASKD 120
GLAAAYLLES PHANKSPQSL PDSDMNEGYE VKEALRVQME VQSKLHLQVE AEKHLLIRQD 180
AEQRYMAMLE RACKMLAEQI VGCTIRGPDR EDYQGLGTKT QIGASHNAYG LQPSESAEVR 240
RIHSPEEVIR QIKQCADCST ESCLTSRDNP AGLCPGGSPS PGGKKRFLSM DSASASFIYG 300
*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-17 | 52 | 108 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-17 | 52 | 108 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-17 | 52 | 108 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-17 | 52 | 108 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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