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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc08_g15690 |
Common Name | GSCOC_T00035509001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
ERF |
Protein Properties |
Length: 372aa MW: 40891.1 Da PI: 6.2811 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc08_g15690 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.8 | 3.1e-19 | 154 | 204 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ +l+g
Cc08_g15690 154 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 204
59********.**********82....35*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048364 | Biological Process | root development |
GO:0048825 | Biological Process | cotyledon development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
Sequence ? help Back to Top |
Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MRDMLTNKKG VKYTEHRKQT TMVRPSPLPT SLACRTRKSP DMNAVKPRVV RISVTDADAT 60 DSSSDEDEEA FKRRHRVKRF INEVKIETFR DNGNGNVNAC TSAGNVNSVW RSRGSAAPAA 120 AGNGTSTTNK KRKKSSGGGG NGKQARVAEG SNVKKFRGVR QRPWGKWAAE IRDPARRVRL 180 WLGTYDTAEE AAMVYDHAAI QLRGPDALTN FATPPARSVS PPAPESATCS GYNSGEESHN 240 NQRSPKSVLR FASTSNSNEE AEAESCLPSP LHEEAVGIGK ERRDSCGEET CVSENFSHYS 300 LIPEDLRFEF EDPVVDFSDL FEDNSNIFEY ARNFDNTFVD SSENVEFGSA MPDDFFSDLG 360 DIFGKDPLVA L*
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