 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc08_g13700 |
Common Name | GSCOC_T00030313001 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
|
Family |
bHLH |
Protein Properties |
Length: 214aa MW: 24105.7 Da PI: 9.5268 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc08_g13700 | genome | CGSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 32.4 | 1.7e-10 | 65 | 116 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
+r h +Er+RR+++ ++ Lr+l+P ++K s ++ +v+Y++++
Cc08_g13700 65 KRIIHRDVERQRRQEMAALYQSLRSLVPDeY---LQGKRSISDHMHGTVKYVRHM 116
6888*************************77...9******************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MEHDELFHFL SIPPQQQMPQ DTPLMARAPN ANSCKPKSCT KKRKSSVAFG DNNVLDNESP 60 VEHKKRIIHR DVERQRRQEM AALYQSLRSL VPDEYLQGKR SISDHMHGTV KYVRHMKRKV 120 DELISKRDEL QELMKPGCSF SMLTEFTVSL NKTSVRVQSS TTGMQIILKT TLRGGLPLSK 180 FLSVLNGEGL SVISCVSTNA NEGQLHVMES EVP*
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 35 | 43 | PKSCTKKRK |
2 | 64 | 76 | KRIIHRDVERQRR |