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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cc07_g06900 |
| Common Name | GSCOC_T00040019001 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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| Family |
LBD |
| Protein Properties |
Length: 222aa MW: 23810 Da PI: 7.6427 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cc07_g06900 | genome | CGSC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 98.9 | 4.9e-31 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+C++C+vlr++C+++C+l+p++ p++q +++ +v+k+FG++ ++++++a+pe++r+++++sl++eA r+ +Pv+Gavg++ ++++q++q+++e
Cc07_g06900 2 SCNGCRVLRKGCSENCILRPCLqwiesPEAQGHATVFVAKFFGRAGLMSFISAVPENQRPALFQSLLFEAAGRTVNPVNGAVGLLGTGNWQVCQAAVE 99
6***********************************************************************************************99 PP
DUF260 94 lall 97
++l+
Cc07_g06900 100 TVLR 103
9876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSENCILR PCLQWIESPE AQGHATVFVA KFFGRAGLMS FISAVPENQR 60
PALFQSLLFE AAGRTVNPVN GAVGLLGTGN WQVCQAAVET VLRGGTLRAI PDHLVGGDSS 120
DLDETVSECT TDISSNGSKM QKRRRKPDEQ AVKVMQLADL DLSLTPGFEG GKYRCLLPEK 180
RRLGSPSMNS EESGTTTCFE SNTTDHQAGT GRGPKLLSLF N*
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