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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc07_g04300 |
Common Name | GSCOC_T00039684001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
TCP |
Protein Properties |
Length: 408aa MW: 44365 Da PI: 7.0937 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc07_g04300 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 99.7 | 5.1e-31 | 63 | 187 | 2 | 105 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........... 88
g+kdrhsk++T +g+RdRRvRls+++a +++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ ++ s+ + + + +++++ g
Cc07_g04300 63 FGGKDRHSKVCTVRGLRDRRVRLSVPTAVQLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLQMPPGSFNHSFQPVWATHHPVVGahqvtkdqglr 160
689*************************************************************7777644433444444443333333333334455 PP
TCP 89 ..........kaaksaakskksqksaa 105
++ +s+++++k+ +s+a
Cc07_g04300 161 igasinwgdhDHHPSEPSGSKTWDSDA 187
555555555533333333333333333 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MIAREIDAAA DVTAKQEGNT ATDEKTSNYK ASISGTSAAA ASSSSSSWSR LKDPRIVRVS 60 RAFGGKDRHS KVCTVRGLRD RRVRLSVPTA VQLYDLQDRL GLSQPSKVVD WLLNAAKHEI 120 DELPPLQMPP GSFNHSFQPV WATHHPVVGA HQVTKDQGLR IGASINWGDH DHHPSEPSGS 180 KTWDSDAILR PKSKELIARS GDSSEDKETW TRSSEEGKQH SNNYESTSHG AAYFSSNNFF 240 SRLGHSTSPS LGLLNSTVLP YNSLIRWDPS NLSLSQSGSP SGLTPVPQPE DFHNFSVVPL 300 PSTMSVPSGG PQVLLYQPAS SITQSYFPSH IAPPVTVDYA QKQIEFQMLN STTENPLTSS 360 LAPPVSDSTS QHAAGRPFRI LSTTTNLLPS QNDRESKQDL DNDFSSR*
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