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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc06_g20160 |
Common Name | GSCOC_T00022925001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
G2-like |
Protein Properties |
Length: 319aa MW: 34613.5 Da PI: 7.0051 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc06_g20160 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 96.6 | 1.8e-30 | 112 | 165 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
Cc06_g20160 112 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 165
59*******************.********************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MREDDSNWFA KWEEELPSPE ELTPLSQTLI TPDLAIYFDI RNPNSPHHHH HHQQNPPPPP 60 PPPAPSQGQN TPSSQPNSSA EFDSSELGGT GGGSGGAGAG SGGEEPARTL KRPRLVWTPQ 120 LHKRFVDAVA HLGIKNAVPK TIMQLMSVDG LTRENVASHL QKYRLYLKRM QSISSGGGNG 180 GGVNGNASMA AAGSEPDLFA STPVPPHFLH PGRPNSDHFL PFVPMTMQHH HQMATVVGHH 240 HPHPQLQQQF RDFGTSPPNG QFEHRFLPRQ SQQQVQRMGT PVHGNTPVMP SYIEDLESAT 300 AASANGRKVL TLFPTGDD*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway. {ECO:0000269|PubMed:20331973}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought, salt and abscisic acid (ABA). Down-regulated by cold. {ECO:0000269|PubMed:20331973}. |