 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cc06_g19290 |
| Common Name | GSCOC_T00028986001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
|
| Family |
E2F/DP |
| Protein Properties |
Length: 355aa MW: 38716 Da PI: 6.4162 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cc06_g19290 | genome | CGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 87.1 | 1.3e-27 | 102 | 184 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71
++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
Cc06_g19290 102 TGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpnntisspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 184
689********...*****999*******************************************************.*******98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0042023 | Biological Process | DNA endoreduplication |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MVNNNQEDGE RNHSALSRGG NGGGGGATRS WGTTVSGQSV STSGSVGSPS SRSEAAMATP 60
ASEGTFLKLN NLDIQGDDAG SQGTAGNRKK KRGQRAVGGD KTGRGLRQFS MKVCEKVESK 120
GRTTYNEVAD ELVAEFADPN NTISSPDQQQ YDEKNIRRRV YDALNVLMAM DIISKDKKEI 180
QWKGLPRTSL NDIEELKNER LGLRNRIEKK AAYLEELEEQ YVGLQNLIQR NEQLYGSGNA 240
PSGGVALPFI LVQTRPHATV EVEISEDMQL VHFDFNSTPF ELHDDNYVLK AMKFCERPQS 300
DNVPQNVSAD GGESSMANVF QPQVHQPSIP SIPARPPTSP PLPGILKARV KHEH*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
