 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc06_g10260 |
Common Name | GSCOC_T00041808001 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
|
Family |
ERF |
Protein Properties |
Length: 328aa MW: 35077.1 Da PI: 5.5054 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc06_g10260 | genome | CGSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.9 | 2.1e-17 | 84 | 134 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+++++g
Cc06_g10260 84 PVYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFACPEMAARAHDVAALSIKG 134
68*****998.**********854...6***********************9987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MADPPHSETE SSSHSGTLDS AHMHHHRKRG RDDNNTTTTT TTSAASRSND DNDTHRSSKN 60 SNIRSQTGNN SNNNNNNNSS SKHPVYRGVR MRAWGKWVSE IREPKKKSRI WLGTFACPEM 120 AARAHDVAAL SIKGNSAILN FPELAGSLPR PATCSPPDVQ AAALKAAQMD FEMDGRAKPG 180 DESSHSQSSS SSSSSSRVMT PCLSSMTSSS SSSSLLSSVT SSSPSSCTEE VSTAAQESEA 240 AAAEELCEIV ELPSLGASYD SVESAREELV FMDSVDNMGW DYGHPWLHGS VETYGYFGEN 300 HAGLMGMAEV DNPVVSGSFE GLLWQLH*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |