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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc06_g09510 |
Common Name | GSCOC_T00041904001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
Trihelix |
Protein Properties |
Length: 360aa MW: 41820.8 Da PI: 4.2175 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc06_g09510 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 37 | 8.8e-12 | 115 | 200 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W ++e +L+e+ e+ +l+r++l++ +W+e ++k+ + g er+ +C++ ++ l+++ykk+++ ++k + s++++f++++
Cc06_g09510 115 WNEEESFVLLEVWGERYLELGRRSLRAEDWAELAEKVsEMSGRERNEMECRNQLDVLKQKYKKERAKMEKVGGGFLSKWVFFKKMD 200
*************************************445688***************************999************7 PP
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Protein Features
? help Back to Top |
 |
Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
Pfam | PF13837 | 1.9E-17 | 112 | 201 | No hit | No description |
Sequence ? help Back to Top |
Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MDDSDEEGPY LTKPTFRSKP AIRNPHSYPL NTHYTTNDAI FAQEDDEFED DEESPQFQNA 60 QSGYYYQSFY EDEPKRSKKK RKLESLVPNY ELAPRAGLNA PKSSNLGGGS SRDSWNEEES 120 FVLLEVWGER YLELGRRSLR AEDWAELAEK VSEMSGRERN EMECRNQLDV LKQKYKKERA 180 KMEKVGGGFL SKWVFFKKMD VLLNLRMRGH VGLGCGVDSG EYVFMNPRVY LDKSNVLDEM 240 RDSPGVSDEE NEEEEEGLGL GKDEEDGESA RLLADSIQRF GEIYEKIESS KRRQMMELEK 300 MRRDFQRDLE LQKQQIVERA QAEIAKIREG VEEEDDDEEE DDDEEEEDDD DVQNENIQV*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 73 | 81 | PKRSKKKRK |
2 | 74 | 80 | KRSKKKR |
3 | 77 | 82 | KKKRKL |