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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc05_g07770 |
Common Name | GSCOC_T00016779001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
NAC |
Protein Properties |
Length: 272aa MW: 30579.5 Da PI: 8.1339 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc05_g07770 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 103.1 | 3.6e-32 | 62 | 202 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWk 84
lp+G++F+P+d+e++ e+L++kv+++ ++++ + ++ +i+ ++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ + +W+
Cc05_g07770 62 LPAGVKFDPSDQEIL-EHLEAKVRSDVhklhplIDEFIHtLEGEnGICCTHPEKLP-GVSKDGLVRHFFHRPSKAYTTGTRKRRKVHtdidgcETRWH 157
799***********9.99******9995554332222222443336**********.555666688******************755457666788** PP
NAM 85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+tgk+++v + kg+++g k+Lv+y gr++k+ekt+Wvmh+y+l
Cc05_g07770 158 KTGKTRPVAV-KGKVKGFEKILVLYtnYGRQRKPEKTNWVMHQYHL 202
**********.999***********66589**************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MTCCSDCSNE RTASRRLPTS PDHHDNANNH ESPKSKQMMA CPSCGLTLQS PEKAGIHDLP 60 GLPAGVKFDP SDQEILEHLE AKVRSDVHKL HPLIDEFIHT LEGENGICCT HPEKLPGVSK 120 DGLVRHFFHR PSKAYTTGTR KRRKVHTDID GCETRWHKTG KTRPVAVKGK VKGFEKILVL 180 YTNYGRQRKP EKTNWVMHQY HLGNNEDEKE GELVVSKVFY QTQPRQCGSL IKDSPVKGNG 240 RIGHEGSHLN NSTFVEYYNS ALISFDQCEE V*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:22133261}. |