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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc04_g15810 |
Common Name | GSCOC_T00042367001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
LBD |
Protein Properties |
Length: 331aa MW: 36938.8 Da PI: 4.7494 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc04_g15810 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 121.9 | 3.5e-38 | 10 | 110 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97
aCaaCk++rrkC++dCvlapyfpa+q+k+f+n+h+lFG+s+++k+l++l e++e+am+s+ ye+++r r Pv+G++g++++l++ql+ + +el+++
Cc04_g15810 10 ACAACKYQRRKCSSDCVLAPYFPANQHKSFQNAHRLFGVSKIVKILEQLsTLEQQEEAMKSIKYESDMRERYPVHGCAGIVHHLREQLRLATEELHYV 107
7************************************************445669****************************************998 PP
DUF260 98 kee 100
++
Cc04_g15810 108 YAQ 110
766 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MTVKGGTSPA CAACKYQRRK CSSDCVLAPY FPANQHKSFQ NAHRLFGVSK IVKILEQLST 60 LEQQEEAMKS IKYESDMRER YPVHGCAGIV HHLREQLRLA TEELHYVYAQ LAAHREQIPN 120 NQQQLGCSSS DYSSSHQPQL LHSGVMINNS CSTTQSIDAL PFFQHHSAGS MHDCEMPFTM 180 DYFLANENYG DDTDANDDEG VRHRDSNDHV AKPLLGLEPV YTNTPPDPNC DLIRNNVNSV 240 VGNQPEVIAN SNQAFGIQPE IKVFDQDYED MPPFNAMVDD RQSYVETKEA CESSSVESSF 300 RDFPQPAEQE SGMESELRTA AACFSLTSVN *
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