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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc04_g09420 |
Common Name | GSCOC_T00022830001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
bHLH |
Protein Properties |
Length: 377aa MW: 42162.6 Da PI: 8.1399 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc04_g09420 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 27.9 | 4.3e-09 | 204 | 251 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq
Cc04_g09420 204 SHSLAERVRREKISERMKILQALVPGC----DKVTGKALMLDEIINYVQSLQ 251
8*************************9....555*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 377 aa
Download sequence Send
to blast |
MATFSYQRQQ QPLHLESSSG LFLQSSSQMR MSAGLLEEPN MTRMTTTTTS FPQFYQPDHF 60 LHQEIPSKSY VNESTCSIFD QSCTKVTHFS NNGPSLTNKT STDSSSVTDK LESGEQVTQK 120 VHAAAMDKKR KTKKGPLPVN SAQSKAIGDQ LAKGKKQRKC GRIMKEDEDK KSNEDKKVPE 180 KAAEEAPPTG YIHVRARRGQ ATDSHSLAER VRREKISERM KILQALVPGC DKVTGKALML 240 DEIINYVQSL QNQVEFLSMK LASLNPMFYD FGMDLDPYIA RPEPTLSNMA SPVQNMQQCD 300 PMQAPIISAT NNSLRTDTAN NYPQLDSSAS ALLIQESHHI PQILSQENGQ LLWDVDDRRQ 360 KLINQTGFNN NLCSFH*
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