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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cc04_g07130 |
| Common Name | GSCOC_T00022518001 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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| Family |
LBD |
| Protein Properties |
Length: 275aa MW: 29571.4 Da PI: 6.8295 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cc04_g07130 | genome | CGSC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 93.8 | 2e-29 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+C++C+vlr++C+++C + p++ p++q++++ +++k++G++ +l+l++a p++ r+ +++sl+yeA+ r+ +P+yG++g++++++++l+q+++e
Cc04_g07130 4 SCNGCRVLRKGCSEKCSIKPCLhwiksPEAQANATVFLAKFYGRAGLLNLINAGPDHLRPGIFRSLLYEACGRIVNPIYGSTGLLWSGNWHLCQAAVE 101
6************************************************************************************************* PP
DUF260 94 lallke 99
++l ++
Cc04_g07130 102 AVLSGS 107
998766 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSEKCS IKPCLHWIKS PEAQANATVF LAKFYGRAGL LNLINAGPDH 60
LRPGIFRSLL YEACGRIVNP IYGSTGLLWS GNWHLCQAAV EAVLSGSPIS QVSADSAACT 120
VCPPLKAGDI RHVSKDENSA GSAARDLHKV KCSKGKFKRA GVKQPKVRVE SPDVDNAARV 180
MWSWSHKEEE EEEEVVGSPS RDSGVSQHVE PPSRGCECGD ADSASVETVE ESLVKPDEPA 240
DGSDVELELT LGFEPVLCRQ RKVGRQESDG GVNK*
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