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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc02_g37750 |
Common Name | GSCOC_T00027948001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
MYB |
Protein Properties |
Length: 314aa MW: 34615 Da PI: 7.3605 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc02_g37750 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57.3 | 3.5e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde+l++++++ G g+W++ +r g+ R++k+c++rw +yl
Cc02_g37750 15 KGPWTPEEDEKLIEYINKNGHGSWRSLPRNAGLLRCGKSCRLRWTNYL 62
79******************************99************97 PP
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2 | Myb_DNA-binding | 47.3 | 4.9e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++++E++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l
Cc02_g37750 68 RGPFSPDEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113
89********************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MGRAPCCDKR MGLKKGPWTP EEDEKLIEYI NKNGHGSWRS LPRNAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FSPDEEKLVI QLHGILGNRW AAIASQLPGR TDNEIKNLWN THLKKRLICL 120 GIDPQTHEPC SNLSGLLQRL PASPSTRHMA QWESARLEAE ARLSKESLLF VPSSTGKSDS 180 DHILRIWNSE VGEAFRNFNK SQKIACESSI SQASSSTKCG SAASGTIAER SLCLAGPSVA 240 GVNQIEDTKC QSSRSAFEDI PPRSDSASSN DLEDSSESTL QLLLDFPGTN DMSFLATTDD 300 YMMYSANNEL NVL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}. |