 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc02_g28210 |
Common Name | GSCOC_T00025191001 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
|
Family |
bHLH |
Protein Properties |
Length: 278aa MW: 31636.3 Da PI: 8.2121 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc02_g28210 | genome | CGSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 38.8 | 1.7e-12 | 96 | 147 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++++h +ErrRR+++ + ++ L llP + +++K s ++ L Av++Ik++
Cc02_g28210 96 KKANHRDIERRRRQEMAKLYASLGNLLPLeC---KKTKRSISDHLLDAVNHIKHM 147
689**************************88...********************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MDDFTYNLIP LLQDDPMLFE YLPISTLHPD LEPAIPHQDL QNQVVASSLA ARQEKTEEII 60 IRNNINTARK RQTKASSAIR ADNHDRGKNP DESKQKKANH RDIERRRRQE MAKLYASLGN 120 LLPLECKKTK RSISDHLLDA VNHIKHMKKN IRELEVKRDK QINLTAGSSN LDVKIVEETN 180 SSAIKFTLRQ CSGGGIEILM KNYLADTKWF PLSKILDVLL DEGLAVVSCV CTKVNEEFLY 240 TIQTEVNADV DLICLQEKLT KNAMTGKDLK VLEQYRN*
|