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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc02_g28190 |
Common Name | GSCOC_T00025186001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
bHLH |
Protein Properties |
Length: 245aa MW: 28074.9 Da PI: 9.4822 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc02_g28190 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 33.4 | 8e-11 | 92 | 143 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
+r+ h +Er+RR+++ + ++ Lr llP +++K s + + A +YIk+
Cc02_g28190 92 KRTFHRDMERQRRQEMANLYASLRNLLPLeY---TKGKRSITDHVHVAENYIKQI 143
799**************************77...*******************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MDDFTNYLFP LQQDDPLLFQ YSPIPSVSFY HKDPTIHRQD LVNQGASSLV SLQPNTGENR 60 NSTARKRQQK PSPAVQADNH DCGKNPVDRK QKRTFHRDME RQRRQEMANL YASLRNLLPL 120 EYTKGKRSIT DHVHVAENYI KQIEKNIRKL EVKRDKLRNL TGGSSYVHLK NVEGKNSFSI 180 NFTVRPCSAG GIEILMKRYV ADTNLVPLSR ILDVLLDEGL TVVSCVCTRV NEEFIYTIQT 240 EVQL*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 91 | 103 | KRTFHRDMERQRR |