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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cc02_g17110 |
| Common Name | GSCOC_T00014217001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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| Family |
SRS |
| Protein Properties |
Length: 205aa MW: 22272.8 Da PI: 8.7441 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cc02_g17110 | genome | CGSC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 102.4 | 8.2e-32 | 15 | 89 | 3 | 78 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel 78
s t++CqdCGnqakkdC++ RCRtCCk+rgf+C+thvkstWvp++krr r+ ++ + s+ +++ ++ ++kr+re+
Cc02_g17110 15 SSTTRCQDCGNQAKKDCVYLRCRTCCKTRGFQCQTHVKSTWVPVSKRRPRHPHQLIS-STPQHHLSDPNPKRSREE 89
57889********************************************97666554.444455677777777765 PP
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| 2 | DUF702 | 80.5 | 4.4e-25 | 86 | 145 | 96 | 155 |
DUF702 96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155
s++el ++P+e++++avfrcvrvss+d+ +++aYqt+v+i+GhvfkG+LydqG++++
Cc02_g17110 86 SREELIEGNFPAELNVPAVFRCVRVSSMDNVVDQFAYQTSVNIAGHVFKGVLYDQGPDNQ 145
344455566************************************************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MMRQDESGGA VGSSSSTTRC QDCGNQAKKD CVYLRCRTCC KTRGFQCQTH VKSTWVPVSK 60
RRPRHPHQLI SSTPQHHLSD PNPKRSREEL IEGNFPAELN VPAVFRCVRV SSMDNVVDQF 120
AYQTSVNIAG HVFKGVLYDQ GPDNQYNIPG ESSSGGGGGG GGSFQQPNLI TQTTSTSTPS 180
PHSTYPSPYS AFMPGAHFFP YPKS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). {ECO:0000269|PubMed:12361963, ECO:0000269|PubMed:16740145, ECO:0000269|PubMed:16740146, ECO:0000269|PubMed:18811619, ECO:0000269|PubMed:20154152, ECO:0000269|PubMed:22318676}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Regulated by ESR1 and ESR2. {ECO:0000269|PubMed:21976484}. |
