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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc02_g14220 |
Common Name | GSCOC_T00013826001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
WOX |
Protein Properties |
Length: 407aa MW: 44999.2 Da PI: 8.7256 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc02_g14220 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 54.6 | 1.8e-17 | 55 | 115 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++ +eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+
Cc02_g14220 55 KPRWNPRPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 115
89*****************99*************************************995 PP
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2 | Wus_type_Homeobox | 111.6 | 4.1e-36 | 54 | 117 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq
Cc02_g14220 54 PKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKQ 117
689***********************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 407 aa
Download sequence Send
to blast |
MASSNRHWPS MFKSKPCNSQ HQWQHEINSS LISNGCQRAP SCASSGSEER SPEPKPRWNP 60 RPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKQRHF 120 QSTTKSQPPQ IPHITSTPPA TKTTSLSSSS SSSEKSSQNS ADKTLSLGPK NLFDTSSSPT 180 ASVNQHFFQS HSAEFLPAPF FFPVQQPPSA AESTPPAAFS QGFCFSDAPS LSHLADNTIQ 240 NSSSILLSDL LLMNHLPTKK VQDEKIKLQQ QLNYTALTTP PITTSQSIFS PTRVAAVSSI 300 DHVHGVGETG SADPTKSTVF INDVAFEVTS AFFNVREAFG DDAVLVHSSG QPVMTNEWGV 360 TLQPLQHGAF YYLIRTSTSS SHDTTIDLVL NLRVVCFHFR SLRNFY*
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