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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc02_g03660 |
Common Name | GSCOC_T00020257001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
bHLH |
Protein Properties |
Length: 251aa MW: 28473.8 Da PI: 5.988 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc02_g03660 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 38.4 | 2.3e-12 | 99 | 149 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53
+r++h +Er RR+++ + f+ Lr llP ++K s ++ + +Av+YI +
Cc02_g03660 99 KRTSHRDVERLRRQEMANLFASLRNLLPLeY---IKGKRSMSDQVHQAVNYITH 149
7****************************77...******************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MDDFTSSLIP LQQDDDSQLF PYDLTIPTIH PYLDDTIHHQ DLGNQAASSL APHQQQHYDQ 60 VTSIDDDDNN NHHPKGRQRK KPSSAIPADN NDPDDSKQKR TSHRDVERLR RQEMANLFAS 120 LRNLLPLEYI KGKRSMSDQV HQAVNYITHK EKNIRELKVK RDKLRNLMGG SSDLNVKSVE 180 ETNSSSTTFT VKQCESGGIE ILMKNDLAGN CFPLSRVLDM LLDEGLNVVN CVCTKVDEKF 240 LYTIQTEVQL *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 98 | 110 | KRTSHRDVERLRR |