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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc00_g30710 |
Common Name | GSCOC_T00008502001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
HSF |
Protein Properties |
Length: 245aa MW: 27749.5 Da PI: 9.1327 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc00_g30710 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 53.2 | 8e-17 | 85 | 151 | 23 | 102 |
SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS
HSF_DNA-bind 23 engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102
++g+sfvv+d+++fa +vL kyF+h+nf+SF+ QLn Y ++ ++ eF++ +F+kgkk+ l+kikr+ +
Cc00_g30710 85 SSGTSFVVWDPHRFAAEVLGKYFRHNNFSSFICQLNRY----INWDR---------LEFQNAWFQKGKKSCLKKIKRRIQ 151
689**********************************9....44444.........79*******************975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MEANQETSEV TNYTKYELKN GENEGERMNP TIPMETDVSE SSSNAIVTAA AAVSTTPFAK 60 QGYANGASSS SSWVRAPPPF LLKSSSGTSF VVWDPHRFAA EVLGKYFRHN NFSSFICQLN 120 RYINWDRLEF QNAWFQKGKK SCLKKIKRRI QGTQNAHLCK PLETEGQLSL SGEQKKFESL 180 IQEHDALKVE TMKLKDMEEN LEKEMEILEK QAQCITSKLQ NMVKHTIHEL LIRKAAKQKA 240 LRAQ*
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