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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc00_g30020 |
Common Name | GSCOC_T00005341001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
bHLH |
Protein Properties |
Length: 260aa MW: 28543.2 Da PI: 9.0426 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc00_g30020 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 26 | 1.6e-08 | 167 | 207 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r RR+ri +++ L++l+P +K++ a++L +A++Y+k L
Cc00_g30020 167 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 207
699*****************87.....8****************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010500 | Biological Process | transmitting tissue development |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0048462 | Biological Process | carpel formation |
GO:2000012 | Biological Process | regulation of auxin polar transport |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MDVDFNKSTP EDQMDLMLLM QMDKLSELTG GFADIHELPM MDFSTNQGSN NNNSSSGAVD 60 HNSHAPSSAF LNLPPSVSFT CSPGQLPQEP SSALPFLSNS SSGRWRNELA GGNGFATESQ 120 KRNSVAAMRE MIFRIAAMQP IHIDPESVKP PKRRNVKISK DPQSVAARHR RERISERIRI 180 LQRLVPGGTK MDTASMLDEA IHYVKFLKNQ VQSLERAAAN RPTGIGFPVP MSSGSYLPMA 240 TKGYHHQAAH QNVQHYADA*
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