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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Carubv10018123m |
| Common Name | CARUB_v10018123mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
TCP |
| Protein Properties |
Length: 173aa MW: 19212.1 Da PI: 6.1556 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Carubv10018123m | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 82.7 | 9.5e-26 | 4 | 76 | 13 | 81 |
TCP 13 TkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssaseceaesssss 81
T+ R RR+Rl+++caa++F+L++eLGf++d+ t+ WLl++a+pai ++tg s++++s++ ++s +s
Carubv10018123m 4 TSSKDRHRRIRLPVTCAAQVFQLTQELGFKTDGATVGWLLRNAEPAILAATGHgldttSNDTPSDF-NHSYMNS 76
78889************************************************7654422222222.2222222 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 173 aa
Download sequence Send
to blast |
MTPTSSKDRH RRIRLPVTCA AQVFQLTQEL GFKTDGATVG WLLRNAEPAI LAATGHGLDT 60
TSNDTPSDFN HSYMNSYNFH GNHIFYNSPI DNSVHYADTS GLVSHPRENI TGHQFPGAST 120
SFPDLMVNHY RPGHGMLRPS VPQPQPQQQP LSDDFDEVET VMGEQGYYQP RE*
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