 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Carubv10012756m |
| Common Name | CARUB_v10012756mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
|
| Family |
GeBP |
| Protein Properties |
Length: 248aa MW: 28080.8 Da PI: 5.7823 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Carubv10012756m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 32.8 | 1.9e-10 | 77 | 109 | 2 | 34 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddi 34
+fq +wse+De++lLqGli++k++tg ++ + +
Carubv10012756m 77 NFQHVWSEDDEVALLQGLINYKTDTGGEALEST 109
79************************8766654 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MVFEGSFKVD PKILVLTEKK VEDGVTVKKV EAPMKPVVTE KQEVKRYVEN RSSETTNEGD 60
SVNRGKVSEK KEKKKPNFQH VWSEDDEVAL LQGLINYKTD TGGEALESTG KSKRVASLKH 120
EDAERVSSSL VRTLVYVGVD ELAAQQGLSM IALEDKKRYE EQKALQAREF DFYSEKAKFL 180
HQITLVHFGV DELAAQQGLS RLASEDMKRY EEQWKALQAR EFDFYSEKAG LLHQMLAEMV 240
EASRSNV*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT1G11510.1 | 1e-19 | DNA-binding storekeeper protein-related transcriptional regulator |
