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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Carubv10007858m |
| Common Name | CARUB_v10007858mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
ARR-B |
| Protein Properties |
Length: 528aa MW: 59979.6 Da PI: 6.7175 |
| Description |
ARR-B family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Carubv10007858m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 65.5 | 9.1e-21 | 208 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+++ Wt L + F++a++++ G +kA+Pk+il +m+v+ Lt+e+v+SHLQkYR+
Carubv10007858m 208 KAKIIWTDSLQNLFLQAIRHI-GLDKAVPKKILAFMNVPYLTRENVASHLQKYRI 261
67999****************.********************************7 PP
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| 2 | Response_reg | 60.7 | 7.5e-21 | 18 | 133 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTC........EEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHH CS
Response_reg 1 vlivdDeplvrellrqalekegy........eevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeee 84
+++ dD+p+++e++ ++lek++y +++ae d +a+ +l +++++Dli++D m+ m+Gl+l+++i++e +lp+iv+++ +
Carubv10007858m 18 IMVLDDDPVFLEVISRMLEKSKYrdpsimdiRVIAEGDP-LKAMSTLklQRNNIDLIIIDYYMSCMNGLQLISKITKEFGNLPVIVMSSDTN-- 108
7999***************88885555532233333333.3444444336666**********************99999********7766.. PP
HHHHHHHTTESEEEESS--HHHHHH CS
Response_reg 85 dalealkaGakdflsKpfdpeelvk 109
+e l Ga+ fl+Kp++p +l k
Carubv10007858m 109 KEQESLTCGAMCFLAKPIKPIDLPK 133
7799****************99977 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 528 aa
Download sequence Send
to blast |
MAFGESFHNQ SSVLRINIMV LDDDPVFLEV ISRMLEKSKY RDPSIMDIRV IAEGDPLKAM 60
STLKLQRNNI DLIIIDYYMS CMNGLQLISK ITKEFGNLPV IVMSSDTNKE QESLTCGAMC 120
FLAKPIKPID LPKIYQIALT SKRNGKSWSE PNHKMLHGQD NALKTRNKCS SNTNASCLST 180
NGSRQNLKRR PNGCLVEDGE SSSRPSKKAK IIWTDSLQNL FLQAIRHIGL DKAVPKKILA 240
FMNVPYLTRE NVASHLQKYR IYLKRVAENG MVSIMSGRSS IESMFRYAHI KEPCFNNYTH 300
VPSWYDTSLN NRSFYSKTEH GFAQSRLLSD TSAPVHFNQM PYNYMNRPST YEPQHIGAGS 360
NSTLPIQRNL SVPNQPSQNE ERRSFFEQHE MANIINQTSQ VHGLGNNVNN SMMSTFGSFT 420
PNQPGLSHFS YENTAHNPQL GMTNELPYNI SNFEFDHNKQ QHEGEEASTK FDLSDELNQI 480
LSLEDDGDWF VNVDQAQDIN PDIRDCSILD TQVDDDFMNS IFNSFMN*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity). {ECO:0000250}. |
