 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Carubv10005452m |
| Common Name | CARUB_v10005452mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
|
| Family |
GeBP |
| Protein Properties |
Length: 278aa MW: 31635.7 Da PI: 8.4327 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Carubv10005452m | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 88.1 | 1.1e-27 | 66 | 161 | 3 | 98 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96
+++ w+e+D +++L+G+++++++t+ s+s+d++++y+ +++s+++++sk+ql +Ki +LK +f++ ++++++g++ sf+++ d++if ls iW
Carubv10005452m 66 PKMNWTETDMLLILRGIVKYQNETKLSYSSDWSGVYDLIRGSMESDFSKRQLQNKILKLKWRFEEYQTRSNDGRSLSFANALDKQIFRLSWAIW 159
6899****************************************************************************************** PP
DUF573 97 gs 98
g+
Carubv10005452m 160 GQ 161
96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MMKRHGEGSD SSEDSSSDCF EIRHNAQPLT RNHEDDDECS GTEATIGERK KMKTKTLLVS 60
SVAAAPKMNW TETDMLLILR GIVKYQNETK LSYSSDWSGV YDLIRGSMES DFSKRQLQNK 120
ILKLKWRFEE YQTRSNDGRS LSFANALDKQ IFRLSWAIWG QNKTKSAFSE NKMDQSKVLK 180
ERVPCVEQVR VSKAIDDGEI DKSEDLNVLQ EALEVAASFQ SFGKYQQKSL LRNLKNLGAT 240
QRKELTDEWK ALLAEEMQLS VKKQSFYAKL VTAAFSA*
|
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G36340.1 | 1e-33 | DNA-binding storekeeper protein-related transcriptional regulator |
