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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.7393s0016.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
NAC |
Protein Properties |
Length: 195aa MW: 22956.8 Da PI: 4.6305 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.7393s0016.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 102.2 | 7.1e-32 | 17 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrF+P de+lv eyL+kkv ++++++ ++e++ ++v+PwdL +++ke+y+F+k+++++ rk r t sgyW++ + +
Cagra.7393s0016.1.p 17 LPPGFRFDPDDEDLVFEYLAKKVLHRPMDF--DLPELRSCNVDPWDLL---GEKNKEVYYFVKKEERE----RKGRETLSGYWEECEE-E 96
79*************************999..49*************6...56789*******99875....899********98866.6 PP
NAM 91 evlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
ev+++ g+l g +kt++fy g++p+g+ t W+m e+rl
Cagra.7393s0016.1.p 97 EVMEAgdreCGHLEGRRKTFAFYIGKKPRGTITPWIMYEFRL 138
77776466666679**************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 195 aa
Download sequence Send
to blast |
MDISAQRFAM NGRSMRLPPG FRFDPDDEDL VFEYLAKKVL HRPMDFDLPE LRSCNVDPWD 60 LLGEKNKEVY YFVKKEERER KGRETLSGYW EECEEEEVME AGDRECGHLE GRRKTFAFYI 120 GKKPRGTITP WIMYEFRLLS SRATRWSSSL LPRGDLGKWR AVKVVVKEEN EEEMMVEDEH 180 ESDDSDGEEV IQSR*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-19 | 15 | 139 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-19 | 15 | 139 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-19 | 15 | 139 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-19 | 15 | 139 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-19 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swm_B | 7e-19 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swm_C | 7e-19 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swm_D | 7e-19 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swp_A | 7e-19 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swp_B | 7e-19 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swp_C | 7e-19 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
3swp_D | 7e-19 | 15 | 139 | 18 | 146 | NAC domain-containing protein 19 |
4dul_A | 5e-19 | 15 | 139 | 15 | 143 | NAC domain-containing protein 19 |
4dul_B | 5e-19 | 15 | 139 | 15 | 143 | NAC domain-containing protein 19 |
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