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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.5133s0002.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
CPP |
Protein Properties |
Length: 595aa MW: 63273.1 Da PI: 7.9631 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.5133s0002.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 45.8 | 1.2e-14 | 124 | 163 | 1 | 41 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41
++kk+CnCk+s+Clk+YCeCfa+g++C+ C+C +C+N+ +
Cagra.5133s0002.1.p 124 QKKKQCNCKHSRCLKLYCECFASGTYCDG-CNCVNCFNNVD 163
589**************************.********986 PP
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2 | TCR | 50.6 | 3.7e-16 | 209 | 248 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e
Cagra.5133s0002.1.p 209 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFE 248
589***********************************65 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 595 aa
Download sequence Send
to blast |
MSEGGGGGEF PPKKDGVEEG FPAKNPARQL DFTGGSDEHS LSKAATAPTV VATAAVKPIV 60 PTSSVPSTIR PGMTIAIGQV RPVATTPILP SQALILNAPI RHPVPDSPQA RARPIVEARD 120 GTPQKKKQCN CKHSRCLKLY CECFASGTYC DGCNCVNCFN NVDNEPARRE AVEATLDRNP 180 FAFRPKIASS PHGVRDKRED IGEVVLLGKH NKGCHCKKSG CLKKYCECFQ ANILCSENCK 240 CLDCKNFEGS EERQALFHGE HANHMAYLQQ AANAAITGAV GSSGFAPSPV PKRRKGQDIM 300 FNQGTKDSSR LGQFPQVNSG RTTGPTSGTS PSPVSRAGGN ASSAPSKFVY RSLLADIIKP 360 QDVKALCSVL VTVAGEAAKT LTAQRKEKEN RVEDQTDTSL ASSAQDHSQD SKDVEMVATD 420 ESQADKSGPE DSNSDGVDAS KAKPLSPATL ALMCDEQDTI FMVAAASPNR SVDPGGCGTN 480 SQSQSEIYAE QERVVLTRFR DCLSRVISYA ELKESKCSSL ARKHQQPPAS ATVKTENGIQ 540 QQVPIVNGTS RTTSQPTVDI PQPLQLMNTT PAAAAAANTH HLHNPPALSE KKDP*
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Functional Description ? help
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Source |
Description |
UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK118658 | 0.0 | AK118658.1 Arabidopsis thaliana At4g29000 mRNA for putative transcription factor, complete cds, clone: RAFL19-93-A20. |
GenBank | BT005931 | 0.0 | BT005931.1 Arabidopsis thaliana At4g29000 gene, complete cds. |