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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cagra.4909s0050.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
ERF |
Protein Properties |
Length: 199aa MW: 22021.2 Da PI: 7.8068 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.4909s0050.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 31 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
ykG+r +k +g+WvAeIr+p +kr r++lg++ t+e Aa+a++ a +l+g
Cagra.4909s0050.1.p 31 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPEAAARAYDTAVFYLRG 80
69*****99.**********9...336*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 199 aa
Download sequence Send
to blast |
METATEVATV VSTPVVTVAA AAATTRKREK PYKGIRMRKW GKWVAEIREP NKRSRIWLGS 60 YSTPEAAARA YDTAVFYLRG PSARLNFPEL LTGVTVSGGG ANGGGDMSAA YIRRKAAEVG 120 AQVDALEAAG GNRHHHHHHN HNQHQRGNHD YGDNHSDYRI NDDHMECNSK EEFKRCNNGS 180 WERVDLNKLP DPETSEDD*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |