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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cagra.4190s0017.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
G2-like |
| Protein Properties |
Length: 339aa MW: 38198.3 Da PI: 9.4272 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cagra.4190s0017.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.3 | 6.2e-32 | 53 | 106 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH rFv+ave+LGG+e+AtPk ++++m++kgL+++hvkSHLQ+YR+
Cagra.4190s0017.1.p 53 PRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYRS 106
8****************************************************7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MITTMEGGGK IDREEEEEED EGEGHESKAS SNSTVEESDK KTKVRPYVRS KVPRLRWTPD 60
LHLRFVRAVE RLGGQERATP KLVRQMMNIK GLSIAHVKSH LQMYRSKKID DHGQAISDHK 120
HLFETSTDRN IYKLSQLPMF RGYNHNNDSP FRYGSKFSNA SLWSSSSHET NRSLIDQIRP 180
GLIRSSSVSN NIRGSEYWTN NRSFQNIYSS SVTSHSPKLR HDHQERTNSA SIQGHSRTFQ 240
NGVEENTNMH GYCNKTTGKR NASTSTDLDL DLSLKLRQPE KTVSEETESA ATTTDQTLSL 300
SLCSGSSALK KSRLIKTDEE DRTVKIGGHQ ASTLDLTL*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-15 | 54 | 108 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-15 | 54 | 108 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-15 | 54 | 108 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-15 | 54 | 108 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK117689 | 0.0 | AK117689.1 Arabidopsis thaliana At2g38300 mRNA for unknown protein, complete cds, clone: RAFL17-35-G17. |
| GenBank | BT004973 | 0.0 | BT004973.1 Arabidopsis thaliana clone U50495 unknown protein (At2g38300) mRNA, complete cds. |
