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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cagra.3678s0010.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
TCP |
| Protein Properties |
Length: 334aa MW: 37195.6 Da PI: 9.0461 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cagra.3678s0010.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 111.2 | 1.4e-34 | 51 | 165 | 2 | 135 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaa 91
g+kdrhsk+ T++g+RdRR+Rls+ +a++f+dLqd+LGfd++sk++eWL+++a +i +l+ +++ +++
Cagra.3678s0010.1.p 51 SGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPPINTNFD------------------QNQ 122
689************************************************************944444..................112 PP
TCP 92 ksaakskksqksaasalnlak.esrakarararertrekmriknk 135
+++ +s +s++s l+l++ e r kar+rarert+++ ++ +
Cagra.3678s0010.1.p 123 TKS--ACSSGTSESSLLSLSRtEIRGKARERARERTAKERDKDLQ 165
222..3334456666799999999************998877655 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008285 | Biological Process | negative regulation of cell proliferation |
| GO:0009965 | Biological Process | leaf morphogenesis |
| GO:0030154 | Biological Process | cell differentiation |
| GO:0045962 | Biological Process | positive regulation of development, heterochronic |
| Sequence ? help Back to Top |
| Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MELDEDVEVQ KQQQQQQQSR KLQRFSDDNT GIMMKDWSNP SSRIIRVSRA SGGKDRHSKV 60
LTSKGLRDRR IRLSVATAIQ FYDLQDRLGF DQPSKAVEWL INAASDSITD LPPINTNFDQ 120
NQTKSACSSG TSESSLLSLS RTEIRGKARE RARERTAKER DKDLQNAQSS FTQLLTGGFD 180
QQQPNNNNRN NWTGGSECFN PVQLMPNSSS SSQLPQEPTT MNQTNHPFSF VPDYNFGISS 240
SSALNGGYSS RGTLQSNSQS LFLNNNNIAQ RSSISSSSSS SSPMDSQSIS FFMATPPPLD 300
HHSHQLPATF DGRLYLYYGE GNRNSDDKGK DRR*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). In association with ABAP1, exerts a negative role in cell proliferation in leaves, possibly by inhibiting mitotic DNA replication. Participates in ovule develpment (PubMed:25378179). {ECO:0000269|PubMed:17307931, ECO:0000269|PubMed:18818695, ECO:0000269|PubMed:25378179}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC073506 | 1e-140 | AC073506.11 Arabidopsis thaliana chromosome 1 BAC F12P21 genomic sequence, complete sequence. |
| GenBank | AY035008 | 1e-140 | AY035008.1 Arabidopsis thaliana unknown protein (At1g30210) mRNA, complete cds. |
| GenBank | AY057672 | 1e-140 | AY057672.1 Arabidopsis thaliana At1g30210/F12P21_11 mRNA, complete cds. |
| GenBank | AY113898 | 1e-140 | AY113898.1 Arabidopsis thaliana unknown protein (At1g30210) mRNA, complete cds. |
| GenBank | CP002684 | 1e-140 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
