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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.2935s0012.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
ERF |
Protein Properties |
Length: 306aa MW: 34745.8 Da PI: 5.2984 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.2935s0012.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 109 | 159 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrd + ng r++lg+f taeeAa a+++a+ +++g
Cagra.2935s0012.1.p 109 KYRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFQTAEEAAMAYDKAAVRIRG 159
8********.**********44465..************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MALGNVQEPD GEILKNVWEN FIRKPQTDKT SVHVPDISRT WEELPTLDNI NIPEDSKELL 60 PSLDMSMEAE EWTEFLNAVA SSPNKTSHDP ITNPTIESFS SRVSCNTRKY RGVRRRPWGK 120 FAAEIRDSTR NGVRVWLGTF QTAEEAAMAY DKAAVRIRGS QKAHTNFQLE TVIKAMEMDC 180 SPNYYPIHSS NTYHTIRSNH GIGSRTEKEA IKANDKVVDG MVDNHCTLSY RSTHEKYTET 240 CGLLGSGGET WLGSRKRRRS DEDSMFQEVK MKKMVTEEET LCDVFGLFEF EDFGSDYLDT 300 LLSSF*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 254 | 258 | RKRRR |
2 | 254 | 259 | RKRRRS |
Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |