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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.1968s0045.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
NAC |
Protein Properties |
Length: 470aa MW: 53728.6 Da PI: 6.5124 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.1968s0045.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 120.6 | 1.5e-37 | 5 | 138 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
+Gf F+P+deelv +yL+ k++g++ l+ +i+ev+i++++PwdL+ + k+k+ + wyfFs+r++ky +g+r+ r+t+sg Wk tg++
Cagra.1968s0045.1.p 5 VGFGFRPNDEELVGHYLRDKIQGNTSLLQVAISEVNICSYDPWDLRyQsKYKSMDPMWYFFSRRENKYGNGNRQIRTTRSGKWKLTGESV 94
7************************877667**************85246677777********************************** PP
NAM 91 evlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
+v+++ ++g k++L+f ++r p+ +k+dWv+he++
Cagra.1968s0045.1.p 95 DVKDQwgissgFPGKIGHKRVLIFLDARFPDKSKSDWVIHEFHY 138
****97665443345***************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 470 aa
Download sequence Send
to blast |
MEDKVGFGFR PNDEELVGHY LRDKIQGNTS LLQVAISEVN ICSYDPWDLR YQSKYKSMDP 60 MWYFFSRREN KYGNGNRQIR TTRSGKWKLT GESVDVKDQW GISSGFPGKI GHKRVLIFLD 120 ARFPDKSKSD WVIHEFHYNY DLLPHHPKDT YVICRLEYKG NDKSILTANA TDPTPSFVPN 180 MANSAGSVVN QSRQGNSASY NTYSEHDSAN RGQQFNDNFN MQQLPVQGDL GSSFNHIFEY 240 GSANQGHQFG ANFNMVEGYS ESFNPFPEYD PTNYGQWSSH YSNLQQPVPN ESDFWKPVIE 300 ENFEFLVDER TSKTFMQEHY SDHQPKKPVT GTLPDDSSDN DSMTFGDTSS STDSVGSSNE 360 SYHTPMDDIP SLNTVKALHN YEAQEQPKQL KLQCRSKEKV INTQKSECEW KMAEDSIKRH 420 PSIITKTVKQ RWIVLEKRSQ RNAQSHCLKN MIIGVVLFIS IIGSMILVG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold, drought stress and methyl methanesulfonate (MMS) treatment. {ECO:0000269|PubMed:17158162}. |