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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cagra.1968s0009.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
NAC |
| Protein Properties |
Length: 382aa MW: 43630.5 Da PI: 4.6452 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cagra.1968s0009.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 75.5 | 1.2e-23 | 6 | 130 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka...eekewyfFskrdkkyatgkrknra.....tksgyWka 85
++F Ptd lv +yL+++v+++k +ik+ ++y+ ePw Lp k+ ek w++F+kr+ + ++ +r+ + g+Wk+
Cagra.1968s0009.1.p 6 LKFFPTDLKLVEHYLRNRVDTDKD---GFIKDKKLYEQEPWLLPhV--KNdqfVEKGWFYFVKRSCGSDNK-ILRRVpgrggSDGGTWKK 89
69******************9994...45***************42..221236779*****998876553.3344434444779***** PP
NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+g+++++l++++ l+g k+ L +yk ++ + t W+m ey l
Cagra.1968s0009.1.p 90 SGSKENILDTNNFLIGYKQELSYYKHVKE--KATGWCMTEYWL 130
************************65555..58********87 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 382 aa
Download sequence Send
to blast |
VDPSHLKFFP TDLKLVEHYL RNRVDTDKDG FIKDKKLYEQ EPWLLPHVKN DQFVEKGWFY 60
FVKRSCGSDN KILRRVPGRG GSDGGTWKKS GSKENILDTN NFLIGYKQEL SYYKHVKEKA 120
TGWCMTEYWL ASENAAEVFL CNVRVKKNVE DQFQLQTTET NNNIVQQPPL DNNTVSNAFL 180
TGVGGEICDA EAGQQNMDAD DYRFMFDIDQ LDFIYDQQQP PMLPQDSILP LGGQDFRSTV 240
DQDTEVCAEE LGNKLDKKED EDDDRAIQQQ HSHIPLPAQV QDSGKPHVIM EGESVGLGSV 300
TQQREQERMT EEMQSNRYFQ DSYFAGDQQM SPWDNTMTNN NPFGLLFNTL GYETQEPPVA 360
KRANQMSPGF GANCGKRRKQ C*
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