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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.1735s0005.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
ERF |
Protein Properties |
Length: 157aa MW: 17852.3 Da PI: 10.3068 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.1735s0005.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 52 | 1.8e-16 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r +k +g+WvAeIr+p +kr r +lg++ t Aa+a++ a +l+g
Cagra.1735s0005.1.p 32 PYRGIRMRK-WGKWVAEIREP---NKRSRLWLGSYTTDVAAARAYDVAVFYLRG 81
69*****99.**********9...336**********99*************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0009414 | Biological Process | response to water deprivation |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0001078 | Molecular Function | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 157 aa
Download sequence Send
to blast |
MEREREREQE ESTMRKRRQQ HQPHQEIAKR KPYRGIRMRK WGKWVAEIRE PNKRSRLWLG 60 SYTTDVAAAR AYDVAVFYLR GPSARLNFPD LLLQEEDHRS AASADMPAAL IREKAAEVGA 120 RVDALLTSAS KSPLKTADES SLSVIKPDLN QIPGDV*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |