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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cagra.15158s0006.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
B3 |
Protein Properties |
Length: 401aa MW: 44914.6 Da PI: 9.0057 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.15158s0006.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 64 | 2.3e-20 | 57 | 146 | 4 | 95 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
vl++ +lk + l+lp +f++++++k ++s +++l+de+ rsW + l+++k s+++++++GWk+F+++ng +eg +++Fkl+++ + ++
Cagra.15158s0006.1.p 57 VLVTDANLKADSLYLPQDFTSSNDLK-RKSCKIVLKDEEERSWAMDLRFNKVSDTCYISRGWKHFCDENGKNEGSVFTFKLMNNGD-TP 143
57788899999************988.6788**************************************************98544.45 PP
EEE CS
B3 93 vvk 95
+++
Cagra.15158s0006.1.p 144 LLS 146
655 PP
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2 | B3 | 60.7 | 2.4e-19 | 178 | 270 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89
f++ ++++d+lks+r++lp +f++e+g++ +++++tl ++g +W v+l r +sgr+ l+kG k+F kangLk g++++ +l++ ++
Cagra.15158s0006.1.p 178 FVTLTLTNDSLKSSRVYLPLPFVRENGMN--NPRMVTLLGKDGIRWAVNL-LRESSGRMSLGKGMKDFSKANGLKIGESFTMELKW-EN 262
7788899*******************999..5669***************.799999***************************99.77 PP
E..EEEEE CS
B3 90 felvvkvf 97
+++v+++f
Cagra.15158s0006.1.p 263 ATPVLSLF 270
77888876 PP
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3 | B3 | 59.2 | 7.1e-19 | 280 | 373 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89
f++ ++++d+l+++rl lp +f++e++++k++ t+tl ++g +W +l + ++gr+ l+kGW+eF+ angL+ g +++++ ++ ++
Cagra.15158s0006.1.p 280 FVTLTLTHDSLNNNRLGLPLSFMRENNMNKPG--TMTLLGKDGTKWIANL-LQESRGRMSLGKGWREFAIANGLEIGVSFTLESIW-ED 364
7788899*******************999766..8***************.7999999*************************999.88 PP
E..EEEEE- CS
B3 90 felvvkvfr 98
+++++++f+
Cagra.15158s0006.1.p 365 ATPMLSLFS 373
889998875 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MCYTGNNISK KRNHQTEEGV AHQDNNTVLG RGKKVRTNKS EFKAGSSSSD DDNSFFVLVT 60 DANLKADSLY LPQDFTSSND LKRKSCKIVL KDEEERSWAM DLRFNKVSDT CYISRGWKHF 120 CDENGKNEGS VFTFKLMNNG DTPLLSVLPI KSDNGRTQGD KNSSQSYRDS TSPNNNRFVT 180 LTLTNDSLKS SRVYLPLPFV RENGMNNPRM VTLLGKDGIR WAVNLLRESS GRMSLGKGMK 240 DFSKANGLKI GESFTMELKW ENATPVLSLF CKEYRIPNKF VTLTLTHDSL NNNRLGLPLS 300 FMRENNMNKP GTMTLLGKDG TKWIANLLQE SRGRMSLGKG WREFAIANGL EIGVSFTLES 360 IWEDATPMLS LFSIVESTSD KRQQGECCSN ASEEEKSIST *
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