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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.1365s0106.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
NAC |
Protein Properties |
Length: 394aa MW: 43880.9 Da PI: 4.445 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.1365s0106.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 152.7 | 1.7e-47 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88
l+pGfrFhPtd elv +yLk+k+ gkkl + ++i+evdiyk+eP dLp + +k+++ +w+fF++r+kkya+g r+nrat+ gyWk+tgk
Cagra.1365s0106.1.p 6 LAPGFRFHPTDVELVRYYLKRKILGKKLIV-DAIAEVDIYKFEPPDLPdMsFIKGGDLKWHFFCPREKKYASGVRANRATECGYWKTTGK 94
579************************988.89**************96346777888******************************** PP
NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+++vl+ ++e+vg ktLv++ g++p+ge+tdWvmheyrle
Cagra.1365s0106.1.p 95 ERPVLC-NSEVVGKIKTLVYHFGKSPRGERTDWVMHEYRLE 134
******.999*****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLIVDAIAE VDIYKFEPPD LPDMSFIKGG 60 DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC NSEVVGKIKT LVYHFGKSPR 120 GERTDWVMHE YRLEDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FREEDWSDEE 180 ERTDVPTTSN PTIFHEPSKE TSLAVTAADD SNKDCFGGMI SESCVSDFLP TTTNTTSKLP 240 DPSDATNTPM SVAPLAETLQ TPNNNNDDLY AMLDLFDDDE EFLGLTNNEA IHDPGVSAPV 300 CFEGIFNGLP DLGNMYNNMP RTSSYDPVEN SELYLELQDL TAPLPLTAPL NPQTGNDSRS 360 SYLYNQGHFD FSAANDDPYG FSANMGHGPD SEK*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes. {ECO:0000250|UniProtKB:Q9C8W9}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK317217 | 0.0 | AK317217.1 Arabidopsis thaliana AT5G09330 mRNA, complete cds, clone: RAFL22-35-P15. |