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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cagra.1301s0010.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
NAC |
| Protein Properties |
Length: 321aa MW: 37121.6 Da PI: 7.6823 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cagra.1301s0010.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 47.3 | 6.6e-15 | 11 | 126 | 7 | 128 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95
F+ +de +++++Lk+ v + + e++i++vd+++ +P+ + + ++ f + + ++++ gk +sg Wk g+dk ++s+
Cagra.1301s0010.1.p 11 FNVEDEVIISRFLKRMVVNGDSMPEHFIQDVDVFNKNPNVE---F--DAERPRFVIVKPRTESCGKTDG--CESGCWKIIGRDKLIKSEk 93
6678999*********88877555488***********643...2..2233445555556555554443..579*************986 PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
+g++ g kk+L f r p+ k +Wvm+eyrl
Cagra.1301s0010.1.p 94 TGKVLGFKKILKFCLSRGPREYKRSWVMEEYRL 126
78889**************************98 PP
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| 2 | NAM | 31.9 | 3.9e-10 | 180 | 303 | 7 | 128 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL..pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
++P ee v yL ++++ ++ + +++ ++y+++P L p e+ + Fs++ r++ + +gyWk +d+++ s
Cagra.1301s0010.1.p 180 YSPDTEEDDVPYLLTLAATEGNDWPSYVTNNNVYRLHPFALgdPFDQMFEDYGICIFSNET------CRTSDICYDGYWKIMHHDRPIRS 263
56666666668888888888888878899************43322223445566666543......377788899************** PP
NAM 95 kkgelvglkktLvfy......kgrapkgektdWvmheyrl 128
k+ge++g kk++ f+ + +k +W+++eyrl
Cagra.1301s0010.1.p 264 KSGETIGFKKVFRFHtvgelrYVCEGVEVKVTWTIDEYRL 303
***************665543233444479********98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MANELDNVGL FNVEDEVIIS RFLKRMVVNG DSMPEHFIQD VDVFNKNPNV EFDAERPRFV 60
IVKPRTESCG KTDGCESGCW KIIGRDKLIK SEKTGKVLGF KKILKFCLSR GPREYKRSWV 120
MEEYRLTKNL NKKQDHLICK IQFLFRAEII SLLAKHFSYL PTTKSVPVPA NLLLPAYGYY 180
SPDTEEDDVP YLLTLAATEG NDWPSYVTNN NVYRLHPFAL GDPFDQMFED YGICIFSNET 240
CRTSDICYDG YWKIMHHDRP IRSKSGETIG FKKVFRFHTV GELRYVCEGV EVKVTWTIDE 300
YRLNDAKHNK VLCVIKFTST *
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