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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cagra.1301s0005.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
NAC |
| Protein Properties |
Length: 174aa MW: 20629.1 Da PI: 9.8234 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cagra.1301s0005.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 26.6 | 1.7e-08 | 11 | 139 | 11 | 128 |
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97
++e+v yLk + + + + +++++ d+y +P ++ + + ++ y ++r+ + k+ +sg W+ g+dk ++++ +g
Cagra.1301s0005.1.p 11 EDEIVATYLKMIIGDVSWPR-RFLRSQDVYCKNPMTFFaNqAPMILHDGRYLIVNRSLDSG----KTDGCESGCWRVIGRDKLIKTEkTG 95
689************99998.88*************9622222224456788777766543....3334589************998667 PP
NAM 98 elvglkktLvfy.............kgrapkgektdWvmheyrl 128
+ g kk+ f k++++ k Wvm+eyrl
Cagra.1301s0005.1.p 96 KILGFKKVYKFCekeeprsvfkfweKEKRRVRDKRVWVMEEYRL 139
778999999999655555555554434444456999******98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 174 aa
Download sequence Send
to blast |
MEPIRNLQSI EDEIVATYLK MIIGDVSWPR RFLRSQDVYC KNPMTFFANQ APMILHDGRY 60
LIVNRSLDSG KTDGCESGCW RVIGRDKLIK TEKTGKILGF KKVYKFCEKE EPRSVFKFWE 120
KEKRRVRDKR VWVMEEYRLA STWTQGYVIC KIRLLNPNPL EFMLCNHVRG YYV*
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