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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.1157s0001.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
TCP |
Protein Properties |
Length: 360aa MW: 40734.7 Da PI: 7.5386 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.1157s0001.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 136.8 | 1.8e-42 | 112 | 239 | 2 | 133 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaa 91
a+k+drhski+T++g+RdRR+Rls+++a+rfFdLqd+LGfdk+sktieWL+ ++k++ik+l ++ + s+ +++++s+a+ +++k +
Cagra.1157s0001.1.p 112 AKKRDRHSKICTAQGPRDRRMRLSLQIARRFFDLQDMLGFDKASKTIEWLFSKSKASIKQLKESVAASE--GGEDDEHSQAN--EKAKDE 197
789*************************************************************44444..32233333333..223334 PP
TCP 92 ksaakskksqksaasalnlakesrakarararertrekmrik 133
+ k +k+++++ + + ++ke r++ar+rarert km+++
Cagra.1157s0001.1.p 198 ILKVKVSKRRTKTMESSCKMKELRERARKRARERTITKMKMR 239
444466667777777788899*******************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MFPSLDTNGY VLFDTFSPRQ TTILPPFTTH IQSPSSNHHF PSPSFSFSPD FLENADESFL 60 LSQFLFQEQD AAANVVESPR KVCKKLEKKK HNDKCVEEDT TSSEKVSERR MAKKRDRHSK 120 ICTAQGPRDR RMRLSLQIAR RFFDLQDMLG FDKASKTIEW LFSKSKASIK QLKESVAASE 180 GGEDDEHSQA NEKAKDEILK VKVSKRRTKT MESSCKMKEL RERARKRARE RTITKMKMRL 240 SGLVDTSETI SDPQQATREI KISNGAQVLD GKNQEQEWST NVNMVEYQMD SVSIIEKFLG 300 LTSESSSSSI FGDSEESNTN LSSIRGVVAP SEHNTASIAS VDEETNPISS FSLYDYLCY*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 220 | 230 | RERARKRARER |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that prevents axillary bud outgrowth. May also delay early axillary bud development. Probably involved in the auxin-induced control of apical dominance. {ECO:0000269|PubMed:17307924}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed transiently after shoot apical meristem (SAM) decapitation (release from apical dominance). {ECO:0000269|PubMed:17307924}. |