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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.0808s0012.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
TALE |
Protein Properties |
Length: 490aa MW: 54718.1 Da PI: 6.4556 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.0808s0012.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 26.2 | 1.4e-08 | 312 | 349 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yp+ +++ LA+++gL+ qV++WF N R +
Cagra.0808s0012.1.p 312 FEHflHPYPKDSDKIMLARQTGLSRGQVSNWFINARVR 349
554458******************************88 PP
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2 | BELL | 125.9 | 1.5e-40 | 174 | 245 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
erqelq+k +kLls+l+eVd+ Ykqy++q+q+v+ssF+++ag+g+akpYtslAl++iSrhFrcL+dai++qi
Cagra.0808s0012.1.p 174 ERQELQSKLSKLLSILDEVDRTYKQYYHQMQIVVSSFDVIAGCGAAKPYTSLALQTISRHFRCLRDAISGQI 245
79*********************************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 490 aa
Download sequence Send
to blast |
MATYYKTGSS EIYSRPNVQD FVPGNAMVYT NSYSETFPRE STNIDVSASK EIQVLSSFGG 60 VSQQMVEVQD SGSWRDQEDN DRSCFPVMMR LGLSSQIETS RSNNNNEYAN ATQVVSGFTR 120 TIHNSKYLKA AQQLLDEAVN VKKALKQFQP EGDKIGEEKE KFLQTNVAEI PQAERQELQS 180 KLSKLLSILD EVDRTYKQYY HQMQIVVSSF DVIAGCGAAK PYTSLALQTI SRHFRCLRDA 240 ISGQILMIRK SLGGEHDGSD GRGVGISRLR NVDQQVRQQR TLQRLGVMQP HTWRPQRGLP 300 DSSVLVLRAW LFEHFLHPYP KDSDKIMLAR QTGLSRGQVS NWFINARVRL WKPMVEEMYK 360 EEFTDSLEEN DPNLSSENTP EITEIQEQQT ESSSNNGHVS GLASSSMGQS TVARGGAQFM 420 MVSDMTGNGS GGMSLTLGIQ NSDARGDVPM SGGIVHYENT ISGTDFQYLN SHNHQHRLGS 480 SKLLHDFVA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY056796 | 0.0 | AY056796.1 Arabidopsis thaliana At2g16400/F16F14.10 mRNA, complete cds. |
GenBank | BT000609 | 0.0 | BT000609.1 Arabidopsis thaliana putative homeodomain transcription factor (At2g16400/F16F14.10) mRNA, complete cds. |