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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cagra.0799s0114.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
NAC |
| Protein Properties |
Length: 341aa MW: 38460.3 Da PI: 6.7413 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cagra.0799s0114.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 169.3 | 1.3e-52 | 22 | 150 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrFhPtdeel+++yL+ k+ + l +i+evd++++ePw+Lp+++k +ekewyf+s rd+ky+tg r+nrat++gyWkatgkdk
Cagra.0799s0114.1.p 22 LPPGFRFHPTDEELITFYLASKIFHGGLCG-IHISEVDLNRCEPWELPEMAKMGEKEWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDK 110
79*************************877.78***************988999************************************ PP
NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
ev++ +g lvg+kktLvfykgrap+g kt+Wvmheyrle
Cagra.0799s0114.1.p 111 EVFAGgGGPLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLE 150
****866677****************************85 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010014 | Biological Process | meristem initiation |
| GO:0010199 | Biological Process | organ boundary specification between lateral organs and the meristem |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MMLAVEDVLS ELAGEEKNER GLPPGFRFHP TDEELITFYL ASKIFHGGLC GIHISEVDLN 60
RCEPWELPEM AKMGEKEWYF YSLRDRKYPT GLRTNRATTA GYWKATGKDK EVFAGGGGPL 120
VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE TDLSHRHTCK EEWVICRVFN KTGDRKNVGI 180
HNQISYLHNH SLSTAHHHHH HHNHHHEALP LLLEPSNKTL NNFPSLLYED THQTYNNSLL 240
NGSSGHNLDE LKALINPVVS QLNGIIFSPG NNKEEDEFGF NLGVKTEPSS NGGNNNELDV 300
RDYLENPLFQ EASYGLLGLS SSPGPLHMLL DSPCPLGFQL *
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for axillary meristem initiation and separation of the meristem from the main stem. May act as an inhibitor of cell division. {ECO:0000269|PubMed:12837947, ECO:0000269|PubMed:17122068}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By BRM, at the chromatin level, and conferring a very specific spatial expression pattern. {ECO:0000269|PubMed:16854978}. |
| Publications
? help Back to Top |
- Chen C, et al.
Transcriptome profiling reveals roles of meristem regulators and polarity genes during fruit trichome development in cucumber (Cucumis sativus L.).
J. Exp. Bot., 2014. 65(17): p. 4943-58
[PMID:24962999] - Gonçalves B, et al.
A conserved role for CUP-SHAPED COTYLEDON genes during ovule development.
Plant J., 2015. 83(4): p. 732-42
[PMID:26119568] - Balkunde R,Kitagawa M,Xu XM,Wang J,Jackson D
SHOOT MERISTEMLESS trafficking controls axillary meristem formation, meristem size and organ boundaries in Arabidopsis.
Plant J., 2017. 90(3): p. 435-446
[PMID:28161901] - Espinosa-Ruiz A, et al.
TOPLESS mediates brassinosteroid control of shoot boundaries and root meristem development in Arabidopsis thaliana.
Development, 2017. 144(9): p. 1619-1628
[PMID:28320734] - Koyama T,Sato F,Ohme-Takagi M
Roles of miR319 and TCP Transcription Factors in Leaf Development.
Plant Physiol., 2017. 175(2): p. 874-885
[PMID:28842549]
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