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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cagra.0604s0001.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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| Family |
C2H2 |
| Protein Properties |
Length: 320aa MW: 35888.5 Da PI: 7.308 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cagra.0604s0001.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 16.5 | 2.4e-05 | 266 | 288 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+Cp+C+ +F ++ + H+ +H
Cagra.0604s0001.1.p 266 YTCPKCNCVFDTSQKFAAHMLSH 288
9*******************999 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MNYANFFASP PSFSSYQNSH NSSTSFPFNF GSVSGAAYFP NNSIQYEIEH VNRAMDSNPN 60
TWIPVFLPPN ILSHHDIILN ATPISVVYPD QDPAAHYSVA PRYSVARHYA AARHYSVPPH 120
HFGSSNHLVN PHHSTAPHHF AAPHHSDAPH ISAAPYHSVI LHHSNPNTWT PVFVPPNVFG 180
NQHTLLNPTP ISVVYPDQDP LARYYSAAPH HSGTTHHLVA PDHFTAPNHF DAPHHSDTIS 240
VSSTEDDDES DDGRTHSIPC EKYGPYTCPK CNCVFDTSQK FAAHMLSHYK SETDEEKDRR 300
LRARNRKKYR KFMASLRRP*
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