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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.0248s0087.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
NAC |
Protein Properties |
Length: 365aa MW: 40186 Da PI: 4.4235 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.0248s0087.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 144.4 | 6e-45 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88
l+pGfrFhPtd elv +yLk+kv gkk+++ ++i+e+diyk+eP dLp + ++ +++ +wyfF++r+kky++g ++nr+t+ gyWk+tg+
Cagra.0248s0087.1.p 6 LAPGFRFHPTDVELVRYYLKRKVLGKKFRV-NAIAEIDIYKFEPPDLPeRsCLGTGDLKWYFFCPREKKYPKGGKANRSTECGYWKTTGR 94
579***************************.89**************95247777888******************************** PP
NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
d++v ++++vg +tL+++ g+ p+g +tdWv+heyrle
Cagra.0248s0087.1.p 95 DRDVSY-NDQVVGKIRTLIYHFGKIPRGDRTDWVIHEYRLE 134
*****9.999*****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MGKTNLAPGF RFHPTDVELV RYYLKRKVLG KKFRVNAIAE IDIYKFEPPD LPERSCLGTG 60 DLKWYFFCPR EKKYPKGGKA NRSTECGYWK TTGRDRDVSY NDQVVGKIRT LIYHFGKIPR 120 GDRTDWVIHE YRLEDQVLAQ KNVPQDSYVL CVLFKKSGLG PRHGSQYGAP FKDEDWSGEE 180 DEDTQNLVAV PSAVNAGPGP SKETSIVATA SQSTAPKDCL AGVISDSCVS DILPLTATVL 240 PPLTSDVAAH APMSSSPLPE VPQVPPDDDD ELNSMLDLFS VVNDECLLFD DFDCQNEVRH 300 ETGVFVNEEA PVFLGDGNFS GMFDLSNELV MELQDLIQPD TPPPPPPPPA QASNPDDSSS 360 NGQT*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes. {ECO:0000250|UniProtKB:Q9C8W9}. |