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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.0133s0093.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
FAR1 |
Protein Properties |
Length: 214aa MW: 24681.9 Da PI: 7.5614 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.0133s0093.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 94.3 | 1.5e-29 | 47 | 136 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
+fY++YA+ +GF +r+++ ++s r+g++++r++vC+keg+r+ + ++ +++r++ra tr gCka ++vk+ek+gkw+vtk+++eHnH+l+
Cagra.0133s0093.1.p 47 SFYDSYATVMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRLRPRR-SESRKPRAITREGCKALIVVKREKSGKWVVTKFVKEHNHPLS 135
5********************************************99.9***************************************98 PP
FAR1 91 p 91
p
Cagra.0133s0093.1.p 136 P 136
6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MEEHSQPEEE EEMMESSDGK YIVTNETSPL VEPFIGMEFE SEASAKSFYD SYATVMGFVM 60 RVDAFRRSMR DGTVVWRRLV CNKEGFRRLR PRRSESRKPR AITREGCKAL IVVKREKSGK 120 WVVTKFVKEH NHPLSPNVGR SSQLSQTPDE KDAKIRELSA ELSRERKRCA ALQQQLDMVL 180 EEMEEHSNHL STNINNVIQS VREIESNTFT KPL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT004031 | 0.0 | BT004031.1 Arabidopsis thaliana clone RAFL15-31-E07 (R20864) unknown protein (At3g07500) mRNA, complete cds. |
GenBank | BT005083 | 0.0 | BT005083.1 Arabidopsis thaliana clone U20864 unknown protein (At3g07500) mRNA, complete cds. |