PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG034191.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bHLH

Protein Properties

Length: 269aa MW: 30399.4 Da PI: 9.1626

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG034191.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.7	2.8e-10	161	208	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+++Er RR++iNs++ L++++P + +k + a +Le+ ++Y++sLq CCG034191.1 161 SHSIAERIRREKINSKLRCLQDIVPGC----HKPMGMAVMLEEIINYVHSLQ 208 8***********************9....899***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.32E-16	155	223	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.69E-9	155	212	No hit	No description
Gene3D	G3DSA:4.10.280.10	5.8E-15	157	218	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.078	157	207	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.2E-8	161	208	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	7.1E-9	163	213	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence Send to blast
MAEFAEYLQR HGASQPLTEM MDMNMEMLKH LPELNPSILE NFSIIHDFSA DSFLAHQQPE 60 FPATYNHNNL SSTSHPHILS TTPLVHSVSF NQNVFHERKK PKAMEQSKGS SKNVSPTASI 120 NITKKKNNLG RGKKGKNKEK EGNKSKEVIH VRAKRGQATD SHSIAERIRR EKINSKLRCL 180 QDIVPGCHKP MGMAVMLEEI INYVHSLQNQ VEFLSLELAA ASCSNDLKNL TESSKKAQGT 240 NSTDDAQETQ KWSRERYGEI TCFHSTWSI

Functional Description ? help Back to Top
Source	Description
UniProt	Positive regulator of brassinosteroid signaling. {ECO:0000269\|PubMed:12454087}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by brassinosteroid, auxin, ethylene and cytokinin, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269\|PubMed:12454087}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011035067.1	0.0	PREDICTED: transcription factor BEE 1-like
Swissprot	Q8GZ13	2e-42	BEE1_ARATH; Transcription factor BEE 1
TrEMBL	A0A2K2ASF7	0.0	A0A2K2ASF7_POPTR; Uncharacterized protein
STRING	POPTR_0004s09850.1	1e-171	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14412	12	18

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18400.1	2e-44	BR enhanced expression 1

Publications ? help Back to Top
Petridis A,Döll S,Nichelmann L,Bilger W,Mock HP Arabidopsis thaliana G2-LIKE FLAVONOID REGULATOR and BRASSINOSTEROID ENHANCED EXPRESSION1 are low-temperature regulators of flavonoid accumulation. New Phytol., 2016. 211(3): p. 912-25 [PMID:27125220]